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Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 520.0)
Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00179800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g17616... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00272000 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g03100,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00220910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g03100,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G03100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G69290 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G09650 | CRM3, HCF152 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G17616 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g036516 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g041557 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g054745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059183 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067157 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074465 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g075176 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g089316 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g100662 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g116058 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116314 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09008 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g05291 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g09800 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene40645.t1 | CRM3, HCF152,... | plastidial transcript stability factor *(HCF152) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11157 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g14976 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G012400.1 | Ceric.01G012400 | not classified & original description: pacid=50592360... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.01G123400.1 | Ceric.01G123400 | not classified & original description: pacid=50591208... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16736 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35897 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02987 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g04085 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14031 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g02920 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g09114 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Gb_08062 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_34895 | No alias | Pentatricopeptide repeat-containing protein At1g69290... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g31310.1 | LOC_Os07g31310 | Pentatricopeptide repeat-containing protein At4g17616... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g11883 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02279 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03303 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.01 | OrthoFinder output from all 47 species | |
| MA_46631g0010 | No alias | Pentatricopeptide repeat-containing protein At1g69290... | 0.05 | OrthoFinder output from all 47 species | |
| MA_743669g0010 | No alias | Pentatricopeptide repeat-containing protein At1g03100,... | 0.06 | OrthoFinder output from all 47 species | |
| MA_84938g0010 | CRM3, HCF152 | HCF152 plastidial RNA transcript stability factor | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15156 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10706 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g33799 | CRM3, HCF152 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g63894 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04413 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29056 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015033 | CRM3, HCF152 | plastidial transcript stability factor *(HCF152) &... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g12114 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16819 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18655 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo105057 | LOI1, MEF11 | Pentatricopeptide repeat-containing protein At4g14850... | 0.06 | OrthoFinder output from all 47 species | |
| Smo105853 | No alias | Pentatricopeptide repeat-containing protein At3g09650,... | 0.05 | OrthoFinder output from all 47 species | |
| Smo79341 | No alias | Pentatricopeptide repeat-containing protein At3g29230... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g088750.3.1 | Solyc01g088750 | Pentatricopeptide repeat-containing protein At1g69290... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g008410.3.1 | Solyc04g008410 | Pentatricopeptide repeat-containing protein At1g03100,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g32584 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g11662 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019596_P001 | Zm00001e019596 | Pentatricopeptide repeat-containing protein At1g69290... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020088_P001 | CRM3, HCF152,... | HCF152 plastidial RNA transcript stability factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 299 | 331 |
| IPR002885 | Pentatricopeptide_repeat | 361 | 410 |
| IPR002885 | Pentatricopeptide_repeat | 137 | 185 |
| IPR002885 | Pentatricopeptide_repeat | 464 | 510 |
| IPR002885 | Pentatricopeptide_repeat | 97 | 136 |
| IPR002885 | Pentatricopeptide_repeat | 271 | 298 |
| IPR002885 | Pentatricopeptide_repeat | 240 | 268 |
| IPR002885 | Pentatricopeptide_repeat | 436 | 459 |
| IPR002885 | Pentatricopeptide_repeat | 537 | 561 |
| IPR002885 | Pentatricopeptide_repeat | 333 | 358 |
| IPR002885 | Pentatricopeptide_repeat | 212 | 239 |
| No external refs found! |