LOC_Os01g56940.1


Description : homologous recombination repair exonuclease (EXO1)


Gene families : OG_01_0003315 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003315_tree ,
OG_02_0003232 (LandPlants) Phylogenetic Tree(s): OG_02_0003232_tree ,
OG_03_0009945 (SeedPlants) Phylogenetic Tree(s): OG_03_0009945_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g56940.1
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00265020 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.06 Archaeplastida
Cpa|evm.model.tig00000403.40 No alias DNA damage response.DNA repair mechanisms.homologous... 0.01 Archaeplastida
Cre07.g353950 No alias DNA damage response.DNA repair mechanisms.homologous... 0.03 Archaeplastida
GSVIVT01008397001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.05 Archaeplastida
GSVIVT01021316001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.04 Archaeplastida
Gb_14686 No alias homologous recombination repair exonuclease (EXO1) 0.07 Archaeplastida
Pp3c23_8000V3.1 No alias 5\-3\ exonuclease family protein 0.03 Archaeplastida
Solyc02g071530.2.1 No alias homologous recombination repair exonuclease (EXO1) 0.05 Archaeplastida
Solyc03g119070.2.1 No alias homologous recombination repair exonuclease (EXO1) 0.04 Archaeplastida
Zm00001e019645_P001 No alias homologous recombination repair exonuclease (EXO1) 0.05 Archaeplastida
AMTR_s00005p00265020 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.06 LandPlants
AT1G18090 No alias 5'-3' exonuclease family protein 0.03 LandPlants
GSVIVT01008397001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.05 LandPlants
GSVIVT01021316001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.04 LandPlants
Gb_14686 No alias homologous recombination repair exonuclease (EXO1) 0.07 LandPlants
Pp3c23_8000V3.1 No alias 5\-3\ exonuclease family protein 0.01 LandPlants
Solyc02g071530.2.1 No alias homologous recombination repair exonuclease (EXO1) 0.04 LandPlants
Solyc03g119070.2.1 No alias homologous recombination repair exonuclease (EXO1) 0.04 LandPlants
Zm00001e019645_P001 No alias homologous recombination repair exonuclease (EXO1) 0.05 LandPlants
GSVIVT01021316001 No alias DNA damage response.DNA repair mechanisms.homologous... 0.04 SeedPlants
Solyc02g071530.2.1 No alias homologous recombination repair exonuclease (EXO1) 0.04 SeedPlants
Zm00001e019645_P001 No alias homologous recombination repair exonuclease (EXO1) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006085 XPG_DNA_repair_N 1 98
IPR006086 XPG-I_dom 139 226
No external refs found!