MA_904305g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 496.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_904305g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G03880 REME1 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003300 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035618 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036720 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06880 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26165 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27468 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.04 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.04 OrthoFinder output from all 47 species
Ceric.37G053600.1 Ceric.37G053600 not classified & original description: pacid=50616731... 0.04 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26576 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36021 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38688 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50140 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01029885001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_02808 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
Gb_03578 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_05649 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_08569 OTP84 RNA editing factor (OTP82) 0.09 OrthoFinder output from all 47 species
Gb_08968 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_09793 No alias RNA editing factor (MEF7) 0.07 OrthoFinder output from all 47 species
Gb_11925 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_13599 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_21054 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.09 OrthoFinder output from all 47 species
Gb_21237 REME1 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_21442 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_23934 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.09 OrthoFinder output from all 47 species
Gb_23967 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_24633 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_26861 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_28288 CRR22 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_28770 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_32455 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_35793 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_36260 OTP84 Pentatricopeptide repeat-containing protein At1g09410,... 0.06 OrthoFinder output from all 47 species
Gb_37572 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g45850.1 LOC_Os05g45850 Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
LOC_Os06g30940.1 LOC_Os06g30940 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Len_g03683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18929 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26564 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26566 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_103380g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
MA_10428421g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_109016g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_109016g0020 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_115669g0020 EMB2758 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_12023g0010 No alias RNA editing factor (MEF9) 0.04 OrthoFinder output from all 47 species
MA_18277g0010 CRR22 Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
MA_25729g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
MA_43497g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_72442g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
MA_7379g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Msp_g15447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03998 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48708 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107109 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo107192 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo111891 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
Smo11658 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo127010 OTP81 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo135822 CRR2 Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Smo136851 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo174459 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo334 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo417058 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Smo51647 EMB2758 Pentatricopeptide repeat-containing protein At1g15510,... 0.04 OrthoFinder output from all 47 species
Smo61257 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
Smo61782 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Smo81964 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Smo82268 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Smo85091 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
Smo86405 CRR22 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Smo88697 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo90123 OTP84 Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
Smo90222 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo92471 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo95871 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.04 OrthoFinder output from all 47 species
Smo96227 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo99647 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
Spa_g01532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02644 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40438 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008203_P002 Zm00001e008203 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.04 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Zm00001e036537_P001 Zm00001e036537 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 88 119
IPR002885 Pentatricopeptide_repeat 197 221
IPR002885 Pentatricopeptide_repeat 266 292
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 22 69
IPR032867 DYW_dom 296 420
No external refs found!