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  5. MA_8967622g0010

MA_8967622g0010 (EMB80, EMB1275, DEK1, ATDEK1)


Aliases : EMB80, EMB1275, DEK1, ATDEK1

Description : Calpain-type cysteine protease DEK1 OS=Arabidopsis thaliana (sp|q8rvl2|dek1_arath : 171.0)


Gene families : OG0002821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8967622g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00125370 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
AT1G55350 EMB80, EMB1275,... calpain-type cysteine protease family 0.03 OrthoFinder output from all 47 species
Aev_g18410 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.02 OrthoFinder output from all 47 species
Dcu_g03220 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Dde_g03516 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Ehy_g21630 EMB80, EMB1275,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025470001 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Gb_09128 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.05 OrthoFinder output from all 47 species
Lfl_g09130 EMB80, EMB1275,... C2-class (Phytocalpain) calcium-activated protease &... 0.03 OrthoFinder output from all 47 species
Mp2g12820.1 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.04 OrthoFinder output from all 47 species
Smo235391 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Smo236021 EMB80, EMB1275,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Solyc12g100360.1.1 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.04 OrthoFinder output from all 47 species
Zm00001e001376_P002 EMB80, EMB1275,... calcium-activated protease (Phytocalpain) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA

No InterPro domains available for this sequence

No external refs found!