MA_893724g0010 (CDC48B)

Aliases : CDC48B

Description : Cell division control protein 48 homolog B OS=Arabidopsis thaliana (sp|q9zpr1|cd48b_arath : 186.0)

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_893724g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00085p00052820	CDC48A, CDC48,...	Cell division cycle protein 48 homolog OS=Glycine max	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021463.10	No alias	Cell division control protein 48 homolog D...	0.02	OrthoFinder output from all 47 species
Ehy_g03992	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Len_g28733	CIP111	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Mp2g12350.1	emb1354, CDC48C	Calmodulin-interacting protein 111 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Pir_g13004	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g13925	CDC48A, CDC48, ATCDC48	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g15369	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e008227_P001	Zm00001e008227	Cell division control protein 48 homolog E...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	178	206
IPR041569	AAA_lid_3	67	117

External Links

No external refs found!