MA_89328g0010


Description : Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana (sp|b3h4p1|pp450_arath : 419.0)


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_89328g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00187020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g01390... 0.04 OrthoFinder output from all 47 species
Adi_g014971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G010400.1 Ceric.16G010400 not classified & original description: pacid=50589761... 0.03 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.04 OrthoFinder output from all 47 species
Ceric.26G072600.1 EMB2750, Ceric.26G072600 not classified & original description: pacid=50599096... 0.05 OrthoFinder output from all 47 species
Dac_g12820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019029001 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.06 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.03 OrthoFinder output from all 47 species
Gb_36347 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.06 OrthoFinder output from all 47 species
LOC_Os01g07340.1 LOC_Os01g07340 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Len_g03366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g07730.1 No alias Pentatricopeptide repeat-containing protein At1g09900... 0.02 OrthoFinder output from all 47 species
Msp_g25744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010895 No alias not classified & original description: CDS=1-2118 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017150 No alias not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Sam_g10479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g008480.4.1 Solyc01g008480 Pentatricopeptide repeat-containing protein At2g01390... 0.05 OrthoFinder output from all 47 species
Solyc02g065510.1.1 Solyc02g065510 Pentatricopeptide repeat-containing protein At5g66631... 0.04 OrthoFinder output from all 47 species
Tin_g11567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 437 496
IPR002885 Pentatricopeptide_repeat 272 300
IPR002885 Pentatricopeptide_repeat 197 246
IPR002885 Pentatricopeptide_repeat 553 600
No external refs found!