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Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 711.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00262470 | OTP85 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00176600 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00127300 | MEF22,... | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G02980 | OTP85 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G25060 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G03800 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G66520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g010601 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g065393 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067220 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069188 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075673 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32974 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07701 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16632 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g17036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18741 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24413 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25829 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g36202 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g30802 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024917 | No alias | not classified & original description: CDS=1-3621 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0075.g037545 | No alias | not classified & original description: CDS=1-2337 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0094.g043402 | No alias | not classified & original description: CDS=1-2055 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13534 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29689 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29923 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33342 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g76849 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G028200.1 | OTP84, Ceric.02G028200 | not classified & original description: pacid=50583866... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G014900.1 | Ceric.10G014900 | not classified & original description: pacid=50613343... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G015400.1 | CRR22, Ceric.10G015400 | not classified & original description: pacid=50611867... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.11G078400.1 | Ceric.11G078400 | not classified & original description: pacid=50596841... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.13G010300.1 | Ceric.13G010300 | not classified & original description: pacid=50636329... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.13G050400.1 | Ceric.13G050400 | not classified & original description: pacid=50636404... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G033700.1 | VAC1, ECB2,... | not classified & original description: pacid=50617387... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G069700.1 | CRR2, Ceric.18G069700 | not classified & original description: pacid=50622363... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z079200.1 | CRR22, Ceric.1Z079200 | not classified & original description: pacid=50582193... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.23G082400.1 | CRR22, Ceric.23G082400 | not classified & original description: pacid=50611294... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06433 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g17095 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35844 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39805 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43173 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16098 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16368 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008407001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_01327 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_03997 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04420 | OTP86 | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_04533 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_06193 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_07754 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_08036 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10152 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11925 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_13100 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14133 | OTP84 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16032 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_19299 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_20749 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_21054 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_23934 | OTP84 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_24515 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_26158 | CRR22 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_26526 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28288 | CRR22 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30004 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_30190 | No alias | Pentatricopeptide repeat-containing protein At1g18485... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33374 | No alias | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_35396 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_37509 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_37516 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38158 | CRR2 | OTP70 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38249 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38417 | CRR2 | OTP70 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38992 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_40436 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g74600.1 | CRR22, LOC_Os01g74600 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g44210.2 | LOC_Os03g44210 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g51350.1 | LOC_Os04g51350 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03322 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g15365 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17539 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17572 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17785 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20486 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23070 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g30737 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g33406 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07032 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40602 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17002 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22930 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29202 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g46084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06277 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g41047 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g59977 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g61725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63028 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63863 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04536 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g16158 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03223 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53976 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021932 | No alias | not classified & original description: CDS=1-3567 | 0.03 | OrthoFinder output from all 47 species | |
| Smo171135 | OTP84 | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g025700.2.1 | Solyc03g025700 | OTP70 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45669 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05629 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 216 | 264 |
| IPR002885 | Pentatricopeptide_repeat | 115 | 163 |
| IPR002885 | Pentatricopeptide_repeat | 318 | 365 |
| IPR002885 | Pentatricopeptide_repeat | 419 | 466 |
| IPR002885 | Pentatricopeptide_repeat | 14 | 62 |
| IPR002885 | Pentatricopeptide_repeat | 493 | 517 |
| IPR002885 | Pentatricopeptide_repeat | 393 | 418 |
| IPR002885 | Pentatricopeptide_repeat | 292 | 317 |
| IPR032867 | DYW_dom | 592 | 716 |
| No external refs found! |