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Description : plastidial mRNA processing factor (PPR10)
Gene families : OG0006045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006045_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g18940,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00034550 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g02860... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00034670 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g02860... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G02860 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060882 | No alias | stability factor *(PPR10) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g06016 | No alias | stability factor *(PPR10) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02403 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g24126 | No alias | stability factor *(PPR10) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02296 | No alias | stability factor *(PPR10) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07205 | No alias | stability factor *(PPR10) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0185.g056580 | No alias | stability factor *(PPR10) & original description: CDS=1-1563 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G078600.1 | Ceric.12G078600 | stability factor *(PPR10) & original description:... | 0.11 | OrthoFinder output from all 47 species | |
| Dcu_g12598 | No alias | stability factor *(PPR10) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g13980 | EMB1270 | stability factor *(PPR10) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g22337 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02936 | No alias | stability factor *(PPR10) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029248001 | No alias | Pentatricopeptide repeat-containing protein At2g18940,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01037880001 | No alias | Pentatricopeptide repeat-containing protein At5g02860... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_13589 | No alias | plastidial mRNA processing factor (PPR10) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g40120.1 | LOC_Os07g40120 | plastidial mRNA processing factor (PPR10) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g15746 | EMB2453, ATPPR5 | stability factor *(PPR10) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02252 | No alias | stability factor *(PPR10) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_6146g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.04 | OrthoFinder output from all 47 species | |
| MA_96691g0010 | No alias | plastidial mRNA processing factor (PPR10) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25541 | No alias | stability factor *(PPR10) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18131 | No alias | stability factor *(PPR10) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17870 | No alias | stability factor *(PPR10) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13568 | No alias | stability factor *(PPR10) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g107320.3.1 | Solyc01g107320 | plastidial mRNA processing factor (PPR10) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11381 | No alias | stability factor *(PPR10) & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Tin_g09448 | No alias | stability factor *(PPR10) & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 730 | 758 |
| IPR002885 | Pentatricopeptide_repeat | 230 | 291 |
| IPR002885 | Pentatricopeptide_repeat | 407 | 468 |
| IPR002885 | Pentatricopeptide_repeat | 368 | 395 |
| IPR002885 | Pentatricopeptide_repeat | 300 | 361 |
| IPR002885 | Pentatricopeptide_repeat | 478 | 537 |
| IPR002885 | Pentatricopeptide_repeat | 663 | 710 |
| IPR002885 | Pentatricopeptide_repeat | 558 | 605 |
| IPR002885 | Pentatricopeptide_repeat | 768 | 817 |
| No external refs found! |