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Aliases : COBL2
Description : COB cellulose microfibrils and hemicellulose interaction protein
Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_8714955g0010 | |
| Cluster | HCCA: Cluster_136 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene11127.t1 | SEB1, COBL7,... | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g78570 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G001100.1 | COB, Ceric.16G001100 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g00727 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008129001 | IRX6, COBL4 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023291001 | COBL6 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01036565001 | IRX6, COBL4 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036566001 | COB | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36720 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g25499 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g103877.1.1 | COBL6, Solyc01g103877 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g006450.3.1 | COBL10, Solyc10g006450 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26683 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12333 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0010215 | cellulose microfibril organization | IEA | Interproscan |
| CC | GO:0031225 | obsolete anchored component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006918 | COBRA_pln | 50 | 208 |
| No external refs found! |