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  5. MA_85409g0010

MA_85409g0010 (VAMP727, ATVAMP727)


Aliases : VAMP727, ATVAMP727

Description : VAMP7-type R-type SNARE longin protein


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_85409g0010

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0064.g035436 ATVAMP721,... non-SNARE-type phytolongin & original description: CDS=304-1083 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046179 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Cba_g69182 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
GSVIVT01028579001 ATVAMP721,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
MA_945343g0010 VAMP726, ATVAMP726 VAMP7-type R-type SNARE longin protein 0.08 OrthoFinder output from all 47 species
Mp7g07410.1 ATVAMP721,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
Sam_g28378 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Spa_g51308 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Zm00001e003924_P002 VAMP727,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 47 105
IPR001388 Synaptobrevin-like 149 235
No external refs found!