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  5. MA_84527g0010

MA_84527g0010 (GCT)


Aliases : GCT

Description : component MED13 of kinase module of MEDIATOR transcription co-activator complex


Gene families : OG0005581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005581_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_84527g0010
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00198p00028070 GCT,... RNA biosynthesis.RNA polymerase II-dependent... 0.07 OrthoFinder output from all 47 species
AT1G55325 GCT RNA polymerase II transcription mediators 0.17 OrthoFinder output from all 47 species
Ala_g37172 GCT component *(MED13) of kinase module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Aob_g28951 GCT component *(MED13) of kinase module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47629.t1 GCT, Aspi01Gene47629 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014125 GCT component *(MED13) of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ceric.39G047500.1 GCT, Ceric.39G047500 component *(MED13) of kinase module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Ehy_g17091 GCT component *(MED13) of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
GSVIVT01025465001 GCT RNA biosynthesis.RNA polymerase II-dependent... 0.09 OrthoFinder output from all 47 species
Gb_30550 GCT component MED13 of kinase module of MEDIATOR... 0.11 OrthoFinder output from all 47 species
LOC_Os05g37500.1 GCT, LOC_Os05g37500 component MED13 of kinase module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Len_g28451 GCT component *(MED13) of kinase module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Lfl_g29089 GCT component *(MED13) of kinase module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Mp1g01940.1 GCT component MED13 of kinase module of MEDIATOR... 0.09 OrthoFinder output from all 47 species
Msp_g14816 GCT component *(MED13) of kinase module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Ore_g36609 GCT component *(MED13) of kinase module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ppi_g03289 GCT component *(MED13) of kinase module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026430 GCT component *(MED13) of kinase module of MEDIATOR... 0.07 OrthoFinder output from all 47 species
Sam_g17992 No alias component *(MED13) of kinase module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Smo447924 GCT RNA biosynthesis.RNA polymerase II-dependent... 0.05 OrthoFinder output from all 47 species
Solyc04g039950.4.1 GCT, Solyc04g039950 component MED13 of kinase module of MEDIATOR... 0.09 OrthoFinder output from all 47 species
Zm00001e036721_P002 GCT, Zm00001e036721 component MED13 of kinase module of MEDIATOR... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR041285 MID_MedPIWI 574 601
No external refs found!