1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_83882g0010

MA_83882g0010


Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_83882g0010
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00161170 ATL2, TL2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT3G19140 DNF RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G60966 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G00305 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g048849 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g117766 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g28428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03725 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g07858 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g49181 ATL3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04978 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06652 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g19646 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g24368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26269 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13378.t1 Aspi01Gene13378 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29934.t1 Aspi01Gene29934 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene37208.t1 RHA3A, Aspi01Gene37208 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41078.t1 Aspi01Gene41078 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46830.t1 Aspi01Gene46830 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46831.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56880.t1 Aspi01Gene56880 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene65865.t1 Aspi01Gene65865 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030554 No alias not classified & original description: CDS=1-690 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034708 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0091.g042816 No alias not classified & original description: CDS=1-813 0.03 OrthoFinder output from all 47 species
Cba_g31712 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g38589 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.09G083500.1 Ceric.09G083500 not classified & original description: pacid=50586830... 0.03 OrthoFinder output from all 47 species
Ceric.13G013700.1 RHA3A, Ceric.13G013700 not classified & original description: pacid=50636450... 0.02 OrthoFinder output from all 47 species
Ceric.18G057500.1 Ceric.18G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g03607 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g14773 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g31595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23802 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g06659 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g26130 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_15836 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_20666 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_30879 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11480.1 LOC_Os01g11480 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g60730.2 LOC_Os01g60730 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g49550.1 RHA3A, LOC_Os04g49550 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g15170.1 ATL63, TL63,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g29150.1 ATL8, LOC_Os05g29150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g39260.1 LOC_Os05g39260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g11450.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os07g48680.1 LOC_Os07g48680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g02220.1 LOC_Os12g02220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g24490.1 LOC_Os12g24490 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g12736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21636 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g29571 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06594 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29042 XERICO not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_129478g0010 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_130176g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g18716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g22098 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g38146 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28091 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g41833 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g23024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g44046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02769 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18570 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32058 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pp3c23_1651V3.1 Pp3c23_1651 RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000797 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013072 ATL8 not classified & original description: CDS=1-573 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023101 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g03342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc03g123690.1.1 Solyc03g123690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g009780.1.1 Solyc04g009780 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g010175.1.1 RHA2A, Solyc05g010175 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g075320.1.1 ATL2, TL2, Solyc09g075320 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc10g011880.1.1 Solyc10g011880 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc11g066510.3.1 Solyc11g066510 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g02204 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g08408 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g02554 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g03083 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g03901 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g06805 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g35018 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g36563 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e007957_P001 ATL6, Zm00001e007957 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e010029_P001 XERICO, Zm00001e010029 ubiquitin protein ligase (XERICO) 0.02 OrthoFinder output from all 47 species
Zm00001e010787_P001 ATL3, Zm00001e010787 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e014764_P001 Zm00001e014764 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e015905_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e032186_P001 RHA3B, Zm00001e032186 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039314_P001 Zm00001e039314 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 28 50
No external refs found!