Aliases : AGL9, SEP3
Description : transcription factor (MADS/AGL)
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_8378644g0010 | |
Cluster | HCCA: Cluster_154 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g33529 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ceric.12G052200.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01022182001 | AGL104 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g43740.1 | AGL65, LOC_Os11g43740 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
MA_12669g0010 | AGL1, SHP1 | transcription factor (MADS/AGL) | 0.06 | OrthoFinder output from all 47 species | |
MA_1767g0010 | AGL66 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
MA_19007g0010 | AGL3, SEP4 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032487_P001 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e036127_P002 | AGL66, Zm00001e036127 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | HCCA |
MF | GO:0033897 | ribonuclease T2 activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 10 | 52 |
No external refs found! |