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MA_834843g0010 (UBP20)


Aliases : UBP20

Description : Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis thaliana (sp|q9fps7|ubp20_arath : 162.0)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_834843g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G31670 UBP18 ubiquitin-specific protease 18 0.03 OrthoFinder output from all 47 species
Adi_g023978 UBP23 deubiquitinase *(UBP23) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098237 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27664 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13254 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15601 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14993 UBP23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10800 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000696001 UBP15 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Nbi_g05412 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29923 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19569 UBP23 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19055 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012859 UBP18 not classified & original description: CDS=628-2634 0.02 OrthoFinder output from all 47 species
Smo420048 UBP18 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Zm00001e003832_P001 UBP17, Zm00001e003832 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
Zm00001e034400_P002 UBP17, Zm00001e034400 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Zm00001e037788_P002 UBP21, Zm00001e037788 Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 55 168
No external refs found!