LOC_Os01g52170.1


Description : HCF101 protein involved in PS-I assembly. scaffold protein HCF101 of plastidial SUF system transfer phase


Gene families : OG_01_0004619 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004619_tree ,
OG_02_0005788 (LandPlants) Phylogenetic Tree(s): OG_02_0005788_tree ,
OG_03_0007851 (SeedPlants) Phylogenetic Tree(s): OG_03_0007851_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52170.1
Cluster HCCA: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00060790 evm_27.TU.AmTr_v1... Coenzyme metabolism.iron-sulfur cluster assembly... 0.07 Archaeplastida
AT3G24430 HCF101 ATP binding 0.07 Archaeplastida
Cpa|evm.model.tig00000792.13 No alias Fe-S cluster assembly factor HCF101, chloroplastic... 0.02 Archaeplastida
Cre01.g045902 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 Archaeplastida
GSVIVT01015424001 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.14 Archaeplastida
Gb_01824 No alias Fe-S cluster assembly factor HCF101, chloroplastic... 0.04 Archaeplastida
Gb_01825 No alias Fe-S cluster assembly factor HCF101, chloroplastic... 0.07 Archaeplastida
Gb_01826 No alias HCF101 protein involved in PS-I assembly 0.1 Archaeplastida
MA_10427899g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_8824719g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Mp3g25470.1 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.05 Archaeplastida
Pp3c19_20070V3.1 No alias ATP binding 0.1 Archaeplastida
Smo91144 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.05 Archaeplastida
Solyc12g007010.2.1 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.12 Archaeplastida
Zm00001e008773_P004 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.08 Archaeplastida
AMTR_s00142p00060790 evm_27.TU.AmTr_v1... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 LandPlants
AT3G24430 HCF101 ATP binding 0.04 LandPlants
GSVIVT01015424001 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.12 LandPlants
Gb_01825 No alias Fe-S cluster assembly factor HCF101, chloroplastic... 0.05 LandPlants
Gb_01826 No alias HCF101 protein involved in PS-I assembly 0.07 LandPlants
MA_10427899g0010 No alias no hits & (original description: none) 0.06 LandPlants
MA_8824719g0010 No alias no hits & (original description: none) 0.04 LandPlants
Mp3g25470.1 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.03 LandPlants
Pp3c19_20070V3.1 No alias ATP binding 0.09 LandPlants
Smo91144 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.05 LandPlants
Solyc12g007010.2.1 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.11 LandPlants
Zm00001e008773_P004 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.07 LandPlants
AMTR_s00142p00060790 evm_27.TU.AmTr_v1... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 SeedPlants
AT3G24430 HCF101 ATP binding 0.04 SeedPlants
GSVIVT01015424001 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.12 SeedPlants
Gb_01825 No alias Fe-S cluster assembly factor HCF101, chloroplastic... 0.05 SeedPlants
Gb_01826 No alias HCF101 protein involved in PS-I assembly 0.07 SeedPlants
MA_10427899g0010 No alias no hits & (original description: none) 0.06 SeedPlants
MA_8824719g0010 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc12g007010.2.1 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.11 SeedPlants
Zm00001e008773_P004 No alias HCF101 protein involved in PS-I assembly. scaffold... 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002744 MIP18-like 77 151
IPR033756 YlxH/NBP35 171 408
IPR010376 GBBH-like_N 431 512
No external refs found!