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  5. MA_816375g0010

MA_816375g0010 (RHC1A)


Aliases : RHC1A

Description : Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana (sp|o22197|rhc1a_arath : 141.0)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_816375g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G53910 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g02298 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g02428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05960 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g13383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13726 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g03388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008897001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_29787 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.01 OrthoFinder output from all 47 species
MA_19897g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g02165 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g09671 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g20514 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g06037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06797 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc09g074460.3.1 CIP8, Solyc09g074460 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e038199_P001 RHC1A, Zm00001e038199 Probable E3 ubiquitin-protein ligase RHC1A... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 146 188
No external refs found!