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  5. MA_8012412g0010

MA_8012412g0010


Description : 50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea (sp|p82192|rk5_spiol : 121.0)


Gene families : OG0007287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_8012412g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00259120 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT4G01310 No alias Ribosomal L5P family protein 0.06 OrthoFinder output from all 47 species
Aev_g08868 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ala_g07051 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Als_g00607 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Aob_g01084 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aop_g10101 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aspi01Gene03150.t1 Aspi01Gene03150 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046128 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g03728 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dac_g11621 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g18361 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Dde_g06048 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ehy_g04389 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
GSVIVT01027006001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Gb_03076 No alias component psRPL5 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os03g03360.1 LOC_Os03g03360 component psRPL5 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g49952 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g01005 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Mp1g19970.1 No alias component psRPL5 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Msp_g12267 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Nbi_g00386 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ore_g17964 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pnu_g31745 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pp3c1_25850V3.1 Pp3c1_25850 Ribosomal L5P family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_17110V3.1 Pp3c2_17110 Ribosomal L5P family protein 0.03 OrthoFinder output from all 47 species
Ppi_g03610 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sam_g11515 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g35847 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Smo6364 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc09g007560.4.1 Solyc09g007560 component psRPL5 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Tin_g10891 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Zm00001e000182_P001 Zm00001e000182 component psRPL5 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR031310 Ribosomal_L5_N 79 135
No external refs found!