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  5. MA_79622g0010

MA_79622g0010


Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 212.0)


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_79622g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00200350 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G40490 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g116756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21770.t1 Aspi01Gene21770 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008091 No alias not classified & original description: CDS=1-1311 0.03 OrthoFinder output from all 47 species
Cba_g02546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G042300.1 Ceric.04G042300 not classified & original description: pacid=50630995... 0.03 OrthoFinder output from all 47 species
Ceric.14G063200.1 Ceric.14G063200 not classified & original description: pacid=50633319... 0.03 OrthoFinder output from all 47 species
Ceric.35G060600.1 Ceric.35G060600 not classified & original description: pacid=50581737... 0.08 OrthoFinder output from all 47 species
Dac_g33428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29428 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_33485 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35079 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_39961 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g03813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000411 No alias not classified & original description: CDS=1-1413 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014264 No alias not classified & original description: CDS=1-1203 0.03 OrthoFinder output from all 47 species
Sam_g11715 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005680.3.1 Solyc03g005680 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g121710.2.1 Solyc03g121710 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc07g045240.3.1 Solyc07g045240 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g090520.3.1 Solyc09g090520 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11285 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 75
IPR000504 RRM_dom 106 174
No external refs found!