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  5. MA_78643g0010

MA_78643g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_78643g0010
Cluster HCCA: Cluster_578

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.1 OrthoFinder output from all 47 species
AT1G35330 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G72200 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G27940 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G42350 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g006507 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g00750 XERICO E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01042 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Ala_g28428 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g02144 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Als_g04682 RHA3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11008 BRH1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g13718 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15793.t1 Aspi01Gene15793 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene37186.t1 Aspi01Gene37186 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene37208.t1 RHA3A, Aspi01Gene37208 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene56017.t1 BRH1, Aspi01Gene56017 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene59447.t1 Aspi01Gene59447 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene61901.t1 Aspi01Gene61901 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70935.t1 ATL6, Aspi01Gene70935 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Azfi_s0034.g025209 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cba_g34751 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G105300.1 ATL8, Ceric.02G105300 not classified & original description: pacid=50585310... 0.01 OrthoFinder output from all 47 species
Ceric.07G079900.1 Ceric.07G079900 not classified & original description: pacid=50626503... 0.04 OrthoFinder output from all 47 species
Ceric.10G008300.1 Ceric.10G008300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.10G020700.1 RHA2A, Ceric.10G020700 not classified & original description: pacid=50612578... 0.01 OrthoFinder output from all 47 species
Ceric.10G041600.1 Ceric.10G041600 not classified & original description: pacid=50611639... 0.03 OrthoFinder output from all 47 species
Ceric.18G057400.1 RHA3A, Ceric.18G057400 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.22G021000.1 Ceric.22G021000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.34G017800.1 Ceric.34G017800 not classified & original description: pacid=50623173... 0.01 OrthoFinder output from all 47 species
Dac_g04580 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dac_g11553 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g31595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25638 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g24472 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Gb_14312 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_20666 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os01g60730.2 LOC_Os01g60730 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g15110.1 LOC_Os02g15110 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os04g37730.1 LOC_Os04g37730 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g40020.1 LOC_Os05g40020 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g48680.1 LOC_Os07g48680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g29871 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g29872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01413 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Lfl_g17168 ATRING1, RING1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g24704 RHA3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10021g0010 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
MA_189618g0010 ATL8 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_229590g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_280399g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_391590g0010 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43543g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_50561g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_61349g0010 ATL2, TL2 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
MA_98187g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g47443 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Nbi_g24015 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g10397 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g37113 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Solyc02g038805.1.1 Solyc02g038805 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc04g081890.1.1 Solyc04g081890 E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g008640.1.1 RHA2A, Solyc05g008640 RHA2 signal transducer of abscisic acid perception 0.14 OrthoFinder output from all 47 species
Spa_g21253 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g21638 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Spa_g24917 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e041824_P001 ATL43, Zm00001e041824 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 96 139
No external refs found!