LOC_Os07g32430 (Os07g0508000)


Aliases : Os07g0508000

Description : 27.1.2 RNA.processing.RNA helicase embryo defective 3011 (EMB3011)


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os07g32430
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G32490 ESP3, EMB2733 RNA helicase family protein 0.03 Gene family
AT2G35340 MEE29 helicase domain-containing protein 0.02 Gene family
AT5G13010 EMB3011 RNA helicase family protein 0.03 Gene family
Cpa|evm.model.tig00000842.2 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.02 Gene family
Cpa|evm.model.tig00000984.27 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Cpa|evm.model.tig00020531.53 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.01 Gene family
Cre07.g349100 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.04 Gene family
Cre08.g358563 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.03 Gene family
GSVIVT01007911001 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
GSVIVT01029863001 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.05 Gene family
MA_10430150g0010 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
MA_277016g0010 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
MA_5383g0010 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
Smo76120 PACid_15413436 No description available 0.02 Gene family
Smo82212 PACid_15409607 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.03 Gene family
Solyc03g115390.3.1 Solyc03g115390.3 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.04 Gene family
Solyc09g008120.3.1 Solyc09g008120.3 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Solyc10g076910.2.1 Solyc10g076910.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.09 Gene family
Zm00001d015893 GRMZM2G029258 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.07 Gene family
Zm00001d028923 GRMZM2G385931 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.05 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 1018 1104
IPR011545 DEAD/DEAH_box_helicase_dom 622 780
IPR011709 DUF1605 1162 1239
IPR001650 Helicase_C 825 954
No external refs found!