LOC_Os01g49680.1


Description : subunit SSL2/XPB of multifunctional TFIIh complex. component SSL2/XPB of TFIIh basal transcription factor complex


Gene families : OG_01_0004927 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004927_tree ,
OG_02_0005344 (LandPlants) Phylogenetic Tree(s): OG_02_0005344_tree ,
OG_03_0006451 (SeedPlants) Phylogenetic Tree(s): OG_03_0006451_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g49680.1
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00265330 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
MA_10436494g0010 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.05 Archaeplastida
Pp3c6_13890V3.1 No alias homolog of Xeroderma pigmentosum complementation group B 2 0.04 Archaeplastida
Smo147068 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
AMTR_s00001p00265330 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 LandPlants
MA_10436494g0010 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.02 LandPlants
Pp3c6_13890V3.1 No alias homolog of Xeroderma pigmentosum complementation group B 2 0.04 LandPlants
Smo147068 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 LandPlants
Smo230853 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 LandPlants
AMTR_s00001p00265330 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 SeedPlants
Gb_19362 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.01 SeedPlants
MA_10436494g0010 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032830 XPB/Ssl2_N 66 185
IPR006935 Helicase/UvrB_N 281 437
IPR032438 ERCC3_RAD25_C 463 709
No external refs found!