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  5. LOC_Os07g31770

LOC_Os07g31770 (Os07g0501100)


Aliases : Os07g0501100

Description : 16.8.2.1 secondary metabolism.flavonoids.chalcones.naringenin-chalcone synthase Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. TRANSPARENT TESTA 4 (TT4)


Gene families : OG_01_0007348 (Gene family) Phylogenetic Tree(s): OG0007348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os07g31770
Cluster HCCA cluster: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g12180 Os05g0212500 16.8.2.1 secondary... 0.02 Gene family
LOC_Os05g12210 Os05g0212900 16.8.2.1 secondary... 0.02 Gene family
LOC_Os05g12240 Os05g0213100 16.8.2.1 secondary... 0.02 Gene family
LOC_Os10g07040 Os10g0158400 16.8.2.1 secondary... 0.02 Gene family
LOC_Os10g07616 Os10g0162856 16.8.2.1 secondary... 0.02 Gene family
LOC_Os10g08620 Os10g0167900 16.8.2.1 secondary... 0.02 Gene family
Zm00001d016014 GRMZM2G346095 16.8.2.1 secondary... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synth_C 253 397
IPR001099 Chalcone/stilbene_synthase_N 21 243
No external refs found!