MA_771696g0010

Description : Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana (sp|q9lnu6|ppr53_arath : 509.0)

Gene families : OG0042190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_771696g0010
Cluster	HCCA: Cluster_172

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_39962	No alias	Pentatricopeptide repeat-containing protein At5g16860...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	225	251
IPR002885	Pentatricopeptide_repeat	195	223
IPR002885	Pentatricopeptide_repeat	535	558
IPR002885	Pentatricopeptide_repeat	358	405
IPR002885	Pentatricopeptide_repeat	459	507
IPR002885	Pentatricopeptide_repeat	257	304
IPR032867	DYW_dom	633	687

External Links

No external refs found!