LOC_Os01g49000.1

Description : catalytic component of Katanin ATP-dependent microtubule severing complex

Gene families : OG_01_0003594 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003594_tree ,
OG_02_0004912 (LandPlants) Phylogenetic Tree(s): OG_02_0004912_tree ,
OG_03_0007322 (SeedPlants) Phylogenetic Tree(s): OG_03_0007322_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g49000.1
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00082000	evm_27.TU.AmTr_v1...	Cell cycle.cytokinesis.phragmoplast disassembly.Katanin...	0.05	Archaeplastida
AT1G80350	AAA1, LUE1, FTR,...	P-loop containing nucleoside triphosphate hydrolases...	0.05	Archaeplastida
Cre10.g427600	No alias	Enzyme classification.EC_3 hydrolases.EC_3.6 hydrolase...	0.02	Archaeplastida
AMTR_s00122p00082000	evm_27.TU.AmTr_v1...	Cell cycle.cytokinesis.phragmoplast disassembly.Katanin...	0.05	LandPlants
AT1G80350	AAA1, LUE1, FTR,...	P-loop containing nucleoside triphosphate hydrolases...	0.05	LandPlants
Pp3c9_3800V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	LandPlants
AMTR_s00122p00082000	evm_27.TU.AmTr_v1...	Cell cycle.cytokinesis.phragmoplast disassembly.Katanin...	0.05	SeedPlants
AT1G80350	AAA1, LUE1, FTR,...	P-loop containing nucleoside triphosphate hydrolases...	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	271	408
IPR015415	Vps4_C	472	517
IPR041569	AAA_lid_3	430	468

External Links

No external refs found!