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  5. MA_764890g0010

MA_764890g0010 (U2A')


Aliases : U2A'

Description : protein factor U2A of U2 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG0005171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_764890g0010

Target Alias Description ECC score Gene Family Method Actions
Ceric.12G006500.1 U2A', Ceric.12G006500 component *(U2A) of U2 snRNP complex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01001138001 U2A' RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
LOC_Os02g13990.1 U2A', LOC_Os02g13990 protein factor U2A of U2 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017892 U2A' component *(U2A) of U2 snRNP complex & original... 0.04 OrthoFinder output from all 47 species
Solyc03g117940.3.1 U2A', Solyc03g117940 protein factor U2A of U2 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species
Zm00001e006375_P001 U2A', Zm00001e006375 protein factor U2A of U2 small nuclear ribonucleoprotein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006480 N-terminal protein amino acid methylation IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!