- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : UPL1
Description : E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana (sp|q8gy23|upl1_arath : 1179.0)
Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00204480 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G55860 | UPL1 | ubiquitin-protein ligase 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G70320 | UPL2 | ubiquitin-protein ligase 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016298 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067762 | UPL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077941 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087677 | UPL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107426 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g16628 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06583 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16302 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g40877 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29999 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G011900.1 | UPL1, Ceric.29G011900 | E3 ubiquitin ligase *(UPL1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02070 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12771 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009206001 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014698001 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_26784 | UPL2 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g24080.1 | UPL2, LOC_Os12g24080 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05050 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13587 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g02429 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17792 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23911 | UPL1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g23944 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g29717 | UPL1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g33388 | UPL2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g40173 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g45124 | UPL1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g52454 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0070566 | adenylyltransferase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |