- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : no hits & (original description: none)
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_75656g0010 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00218870 | ANR1, AGL44,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00001p00267050 | AGL6,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00001p00270400 | AGL32, TT16,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00254030 | SHP2, AGL5,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00244880 | AGL61, DIA,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00071p00193200 | STK, AGL11,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G22130 | AGL104 | AGAMOUS-like 104 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G03060 | AGL30 | AGAMOUS-like 30 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G22540 | SVP, AGL22 | K-box region and MADS-box transcription factor family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G58780 | AGL1, SHP1 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G24540 | AGL24 | AGAMOUS-like 24 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G20240 | PI | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G60910 | AGL8, FUL | AGAMOUS-like 8 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g033073 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g045544 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06477 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g09257 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33356 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17593.t1 | AGL104, Aspi01Gene17593 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17826.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19451.t1 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene44552.t1 | AGL13, Aspi01Gene44552 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene54037.t3 | Aspi01Gene54037 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene63673.t1 | STK, AGL11,... | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene68989.t2 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g23820 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G051800.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g21427 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008139001 | AGL2, SEP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008806001 | PI | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01009171001 | SVP, AGL22 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012250001 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01019883001 | GL19, AGL19 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027577001 | AGL6 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01038474001 | AGL16 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12586 | AGL61, DIA | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g54170.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g23980.1 | AGL16, LOC_Os06g23980 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g43740.1 | AGL65, LOC_Os11g43740 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g08300 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36481 | No alias | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40583 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_175522g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_19296g0010 | AGL9, SEP3 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_3200737g0010 | AGL24 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_6279308g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_770623g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_9544285g0010 | AGL42 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g09451 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43918 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02948 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g46921 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25142 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25344 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56526 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002217 | AGL15 | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003429 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006239 | SHP2, AGL5 | not classified & original description: CDS=497-1018 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012202 | No alias | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g093960.3.1 | AGL6, Solyc01g093960 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g106710.1.1 | AGL62, Solyc01g106710 | component MED19 of head module of MEDIATOR transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g089210.4.1 | AGL7, AP1, Solyc02g089210 | transcription factor (MADS/AGL) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g091550.2.1 | AGL21, Solyc02g091550 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g005320.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g012020.4.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g069430.3.1 | AGL8, FUL, Solyc06g069430 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g150109.1.1 | SOC1, AGL20,... | MADS-box protein AGL42 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g017640.1.1 | GL19, AGL19,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g080030.2.1 | AGL18, Solyc10g080030 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g069770.2.1 | AGL29, Solyc11g069770 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07554 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22852 | AGL65 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26227 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55243 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23921 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003667_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006950_P001 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030373_P001 | AGL10, CAL1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031267_P003 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039774_P001 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |