LOC_Os01g48180.1


Description : HOX-like transcription factor


Gene families : OG_01_0001780 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001780_tree ,
OG_02_0002605 (LandPlants) Phylogenetic Tree(s): OG_02_0002605_tree ,
OG_03_0003028 (SeedPlants) Phylogenetic Tree(s): OG_03_0003028_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g48180.1
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00137050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00058p00137050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
MA_2434g0010 No alias HOX-like transcription factor 0.02 LandPlants
Mp1g04480.1 No alias HOX-like transcription factor 0.02 LandPlants
Smo422901 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 LandPlants
Zm00001e020198_P001 No alias HOX-like transcription factor 0.02 LandPlants
Zm00001e028032_P001 No alias HOX-like transcription factor 0.02 LandPlants
AMTR_s00058p00137050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 SeedPlants
Zm00001e020198_P001 No alias HOX-like transcription factor 0.02 SeedPlants
Zm00001e028032_P001 No alias HOX-like transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR028941 WHIM2_dom 956 1028
IPR018501 DDT_dom 387 435
IPR007759 Asxl_HARE-HTH 555 623
IPR028942 WHIM1_dom 778 820
No external refs found!