1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g47740.1

LOC_Os01g47740.1


Description : Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza sativa subsp. japonica (sp|q5qlr5|zfp1_orysj : 975.0)


Gene families : OG_01_0000125 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000125_tree ,
OG_02_0000151 (LandPlants) Phylogenetic Tree(s): OG_02_0000151_tree ,
OG_03_0000175 (SeedPlants) Phylogenetic Tree(s): OG_03_0000175_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47740.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00192380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G17970 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G42940 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Gb_18500 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g07790.1 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g14320.1 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_35916g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Pp3c22_1990V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Solyc09g007530.3.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Solyc10g007140.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.03 Archaeplastida
Zm00001e000545_P002 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e008630_P002 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e013125_P002 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
Zm00001e028021_P003 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.03 Archaeplastida
Zm00001e028107_P001 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 Archaeplastida
Zm00001e029867_P003 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 Archaeplastida
AT5G42940 No alias RING/U-box superfamily protein 0.02 LandPlants
Gb_24355 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 LandPlants
MA_35916g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 LandPlants
Solyc10g007140.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 LandPlants
Solyc10g050170.3.1 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e013125_P002 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 LandPlants
Zm00001e028021_P003 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.03 LandPlants
AMTR_s00034p00079510 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 SeedPlants
AT5G42940 No alias RING/U-box superfamily protein 0.02 SeedPlants
Gb_24355 No alias E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 SeedPlants
LOC_Os04g55510.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 SeedPlants
MA_35916g0010 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 SeedPlants
Solyc08g006460.3.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.01 SeedPlants
Solyc10g007140.3.1 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.02 SeedPlants
Zm00001e028021_P003 No alias Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 471 513
No external refs found!