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  5. MA_739517g0010

MA_739517g0010


Description : no hits & (original description: none)


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_739517g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00319p00013650 QRT3,... Polygalacturonase QRT3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G20050 QRT3 Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g16422 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27397 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35331 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67503 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g53005 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G061400.1 QRT3, Ceric.15G061400 polygalacturonase *(QRT3) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G028400.1 QRT3, Ceric.21G028400 polygalacturonase *(QRT3) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g16097 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31759 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012139001 QRT3 Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
LOC_Os04g52320.1 QRT3, LOC_Os04g52320 polygalacturonase (QRT3) 0.04 OrthoFinder output from all 47 species
Len_g58007 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58008 QRT3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29972 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13496 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40884 No alias polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g068400.3.1 QRT3, Solyc02g068400 polygalacturonase (QRT3) 0.05 OrthoFinder output from all 47 species
Solyc02g068410.3.1 Solyc02g068410 polygalacturonase (QRT3) 0.02 OrthoFinder output from all 47 species
Spa_g33866 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44469 QRT3 polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006958_P005 QRT3, Zm00001e006958 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!