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  5. MA_73622g0010

MA_73622g0010 (ATXR6, SDG34)


Aliases : ATXR6, SDG34

Description : class IV histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_73622g0010
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00052390 ATXR6, SDG34,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Als_g13888 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.11 OrthoFinder output from all 47 species
Aop_g09442 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.11 OrthoFinder output from all 47 species
Aspi01Gene00278.t1 ATXR6, SDG34,... class-IV histone methyltransferase *(ATXR5/6) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0030.g024356 SDG15, ATXR5 class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01038589001 ATXR6, SDG34 Chromatin organisation.histone modifications.histone... 0.15 OrthoFinder output from all 47 species
Gb_02491 ATXR6, SDG34 class IV histone methyltransferase component of histone... 0.13 OrthoFinder output from all 47 species
LOC_Os02g03030.1 ATXR6, SDG34,... class IV histone methyltransferase component of histone... 0.04 OrthoFinder output from all 47 species
Mp5g03760.1 SDG15, ATXR5 class IV histone methyltransferase component of histone... 0.09 OrthoFinder output from all 47 species
Nbi_g10637 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010677 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.05 OrthoFinder output from all 47 species
Solyc03g082860.3.1 ATXR6, SDG34,... class IV histone methyltransferase component of histone... 0.12 OrthoFinder output from all 47 species
Spa_g43410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013505_P001 ATXR6, SDG34,... class IV histone methyltransferase component of histone... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 252 327
IPR019787 Znf_PHD-finger 27 74
No external refs found!