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  5. MA_72442g0020

MA_72442g0020


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 313.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_72442g0020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
AMTR_s00126p00080460 OTP82,... Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Adi_g003245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003300 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004484 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g005778 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015988 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018634 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035559 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035618 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036720 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059043 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069220 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079640 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082696 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100622 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g102724 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107292 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g113573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427342g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
MA_10428421g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.17 OrthoFinder output from all 47 species
MA_10429837g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_10436764g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_108139g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_109134g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_11517g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.11 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_121102g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_13057g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_135424g0010 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.09 OrthoFinder output from all 47 species
MA_141731g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_18277g0010 CRR22 Pentatricopeptide repeat-containing protein At4g39530... 0.08 OrthoFinder output from all 47 species
MA_184104g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_205762g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_20899g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_210823g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g37170... 0.05 OrthoFinder output from all 47 species
MA_25515g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
MA_25729g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.33 OrthoFinder output from all 47 species
MA_27138g0010 No alias RNA editing factor (MEF7) 0.06 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.04 OrthoFinder output from all 47 species
MA_28390g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_305950g0010 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_30632g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_32723g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_3471g0010 OTP84 RNA editing factor (MEF19) 0.07 OrthoFinder output from all 47 species
MA_35442g0010 No alias RNA editing factor (SLO2) 0.02 OrthoFinder output from all 47 species
MA_38687g0010 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.05 OrthoFinder output from all 47 species
MA_41676g0020 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.06 OrthoFinder output from all 47 species
MA_43727g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_4503g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_49292g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_50118g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.17 OrthoFinder output from all 47 species
MA_519985g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_56660g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_59148g0010 CRR22 RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
MA_632994g0010 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
MA_640827g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.09 OrthoFinder output from all 47 species
MA_6511g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_68933g0010 CRR22 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.12 OrthoFinder output from all 47 species
MA_733561g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.12 OrthoFinder output from all 47 species
MA_7379g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
MA_742g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_74986g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.08 OrthoFinder output from all 47 species
MA_87646g0010 No alias RNA editing factor (MEF13) 0.06 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.07 OrthoFinder output from all 47 species
MA_904305g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_905781g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
MA_9258g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_953240g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
MA_957690g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_97789g0010 CRR22 Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Sam_g02113 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo101 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo101455 CRR22 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Smo107192 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo110980 OTP82 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Smo111891 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.01 OrthoFinder output from all 47 species
Smo11658 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
Smo116842 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo127010 OTP81 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Smo135822 CRR2 Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Smo136851 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Smo138241 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Smo16655 No alias Pentatricopeptide repeat-containing protein At1g06140,... 0.03 OrthoFinder output from all 47 species
Smo174459 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo24361 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.04 OrthoFinder output from all 47 species
Smo334 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.01 OrthoFinder output from all 47 species
Smo417058 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Smo51647 EMB2758 Pentatricopeptide repeat-containing protein At1g15510,... 0.02 OrthoFinder output from all 47 species
Smo61257 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
Smo72148 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Smo77859 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Smo81964 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Smo82268 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.01 OrthoFinder output from all 47 species
Smo85091 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.02 OrthoFinder output from all 47 species
Smo85102 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo86405 CRR22 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Smo88697 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo90222 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Smo90563 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Smo92471 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo95871 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.02 OrthoFinder output from all 47 species
Smo96227 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 14 37
IPR002885 Pentatricopeptide_repeat 79 108
IPR032867 DYW_dom 113 256
No external refs found!