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  5. MA_724304g0010

MA_724304g0010


Description : Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii (sp|q9zrx0|tctp_psemz : 276.0)


Gene families : OG0002540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_724304g0010
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Adi_g053906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14653 TCTP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G052900.1 TCTP, Ceric.36G052900 not classified & original description: pacid=50568889... 0.04 OrthoFinder output from all 47 species
Dde_g01960 TCTP not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017723001 No alias Translationally-controlled tumor protein homolog... 0.03 OrthoFinder output from all 47 species
Gb_01285 TCTP Translationally-controlled tumor protein homolog... 0.03 OrthoFinder output from all 47 species
LOC_Os11g43900.1 LOC_Os11g43900 Translationally-controlled tumor protein homolog... 0.06 OrthoFinder output from all 47 species
Nbi_g38387 TCTP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099770.3.1 Solyc01g099770 Translationally-controlled tumor protein homolog... 0.05 OrthoFinder output from all 47 species
Zm00001e013417_P002 TCTP, Zm00001e013417 Translationally-controlled tumor protein homolog OS=Zea... 0.05 OrthoFinder output from all 47 species
Zm00001e013418_P001 TCTP, Zm00001e013418 Translationally-controlled tumor protein homolog OS=Zea... 0.05 OrthoFinder output from all 47 species
Zm00001e013419_P001 TCTP, Zm00001e013419 Translationally-controlled tumor protein homolog OS=Zea... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051382 kinetochore assembly IEP HCCA
BP GO:0051383 kinetochore organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR018105 Translational_control_tumour_p 1 163
No external refs found!