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Description : DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana (sp|q9sw44|rh16_arath : 150.0)
Gene families : OG0005612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_71366g0010 | |
| Cluster | HCCA: Cluster_162 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00048130 | evm_27.TU.AmTr_v1... | DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT4G34910 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G071500.1 | Ceric.24G071500 | not classified & original description: pacid=50629253... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g526850 | No alias | DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38528 | No alias | DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g51900.1 | LOC_Os03g51900 | DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g04610.1 | No alias | DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g20486 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29793 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo440996 | No alias | DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g070100.3.1 | Solyc02g070100 | DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g40380 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012111_P001 | Zm00001e012111 | DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |