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  5. MA_694512g0010

MA_694512g0010 (RPS1, ARRPS1)


Aliases : RPS1, ARRPS1

Description : 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea (sp|p29344|rr1_spiol : 263.0)


Gene families : OG0002574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_694512g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00212290 RPS1, ARRPS1,... Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
AT5G30510 RPS1, ARRPS1 ribosomal protein S1 0.08 OrthoFinder output from all 47 species
Adi_g033757 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aev_g03971 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ala_g01963 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g07823 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Als_g32395 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aob_g17787 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aop_g12017 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aop_g41967 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aspi01Gene13361.t1 RPS1, ARRPS1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene46819.t1 RPS1, ARRPS1,... component *(bS1c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Azfi_s0030.g024427 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g16776 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cba_g16777 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ceric.32G044800.1 RPS1, ARRPS1,... component *(bS1c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.13 RPS1, ARRPS1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre09.g394750 RPS1, ARRPS1 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dac_g12960 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Dcu_g08135 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dde_g07822 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g01340 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01034940001 RPS1, ARRPS1 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Gb_02217 RPS1, ARRPS1 component psRPS1 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
LOC_Os03g20100.1 RPS1, ARRPS1,... component psRPS1 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g02246 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Msp_g22203 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Nbi_g09544 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ore_g07549 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Pir_g10266 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Pnu_g11886 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c10_21790V3.1 RPS1, ARRPS1,... ribosomal protein S1 0.02 OrthoFinder output from all 47 species
Ppi_g05695 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017184 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g07761 No alias component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Smo271018 RPS1, ARRPS1 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc01g057830.3.1 RPS1, ARRPS1,... component psRPS1 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Spa_g01530 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Spa_g07743 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Tin_g04575 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 9 79
No external refs found!