LOC_Os01g43590.1


Description : transcription factor (HSF)


Gene families : OG_01_0000090 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000090_tree ,
OG_02_0017843 (LandPlants) Phylogenetic Tree(s): OG_02_0017843_tree ,
OG_03_0017389 (SeedPlants) Phylogenetic Tree(s): OG_03_0017389_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g43590.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AT2G26150 HSFA2, ATHSFA2 heat shock transcription factor A2 0.04 Archaeplastida
AT3G22830 AT-HSFA6B, HSFA6B heat shock transcription factor A6B 0.03 Archaeplastida
AT3G51910 AT-HSFA7A, HSFA7A heat shock transcription factor A7A 0.07 Archaeplastida
AT3G63350 HSFA7B, AT-HSFA7B winged-helix DNA-binding transcription factor family protein 0.04 Archaeplastida
AT5G03720 HSFA3, AT-HSFA3 heat shock transcription factor A3 0.04 Archaeplastida
GSVIVT01003118001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
GSVIVT01018041001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.06 Archaeplastida
GSVIVT01019829001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
GSVIVT01020781001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 Archaeplastida
GSVIVT01022134001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
GSVIVT01035385001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 Archaeplastida
Gb_00558 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 Archaeplastida
Gb_14573 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os01g54550.1 No alias transcription factor (HSF) 0.05 Archaeplastida
LOC_Os03g25120.1 No alias transcription factor (HSF) 0.06 Archaeplastida
LOC_Os09g28200.1 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os09g35790.1 No alias transcription factor (HSF) 0.06 Archaeplastida
MA_41252g0020 No alias transcription factor (HSF) 0.03 Archaeplastida
MA_9434330g0010 No alias transcription factor (HSF) 0.03 Archaeplastida
Smo107503 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
Solyc06g053960.3.1 No alias transcription factor (HSF) 0.03 Archaeplastida
Solyc07g040680.3.1 No alias transcription factor (HSF) 0.03 Archaeplastida
Solyc08g062960.4.1 No alias transcription factor (HSF) 0.03 Archaeplastida
Solyc08g080540.3.1 No alias transcription factor (HSF) 0.05 Archaeplastida
Solyc10g079380.2.1 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e003755_P002 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e009944_P001 No alias transcription factor (HSF) 0.05 Archaeplastida
Zm00001e024268_P001 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e032174_P001 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e034782_P002 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e035680_P002 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e038685_P001 No alias transcription factor (HSF) 0.05 Archaeplastida
Zm00001e041441_P001 No alias transcription factor (HSF) 0.02 Archaeplastida
Zm00001e027914_P001 No alias transcription factor (HSF) 0.02 LandPlants
Zm00001e027914_P001 No alias transcription factor (HSF) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 27 125
No external refs found!