LOC_Os01g43590.1

Description : transcription factor (HSF)

Gene families : OG_01_0000090 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000090_tree ,
OG_02_0017843 (LandPlants) Phylogenetic Tree(s): OG_02_0017843_tree ,
OG_03_0017389 (SeedPlants) Phylogenetic Tree(s): OG_03_0017389_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g43590.1
Cluster	HCCA: Cluster_251

Target	Alias	Description	ECC score	Gene Family Method
AT2G26150	HSFA2, ATHSFA2	heat shock transcription factor A2	0.04	Archaeplastida
AT3G22830	AT-HSFA6B, HSFA6B	heat shock transcription factor A6B	0.03	Archaeplastida
AT3G51910	AT-HSFA7A, HSFA7A	heat shock transcription factor A7A	0.07	Archaeplastida
AT3G63350	HSFA7B, AT-HSFA7B	winged-helix DNA-binding transcription factor family protein	0.04	Archaeplastida
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.04	Archaeplastida
GSVIVT01003118001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01018041001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.06	Archaeplastida
GSVIVT01019829001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01020781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
GSVIVT01022134001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01035385001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
Gb_00558	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.04	Archaeplastida
Gb_14573	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os01g54550.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
LOC_Os03g25120.1	No alias	transcription factor (HSF)	0.06	Archaeplastida
LOC_Os09g28200.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os09g35790.1	No alias	transcription factor (HSF)	0.06	Archaeplastida
MA_41252g0020	No alias	transcription factor (HSF)	0.03	Archaeplastida
MA_9434330g0010	No alias	transcription factor (HSF)	0.03	Archaeplastida
Smo107503	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc07g040680.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc08g062960.4.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc08g080540.3.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
Solyc10g079380.2.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e003755_P002	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e009944_P001	No alias	transcription factor (HSF)	0.05	Archaeplastida
Zm00001e024268_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e032174_P001	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e034782_P002	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.03	Archaeplastida
Zm00001e038685_P001	No alias	transcription factor (HSF)	0.05	Archaeplastida
Zm00001e041441_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e027914_P001	No alias	transcription factor (HSF)	0.02	LandPlants
Zm00001e027914_P001	No alias	transcription factor (HSF)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	27	125

External Links

No external refs found!

LOC_Os01g43590.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation