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  5. MA_6626g0010

MA_6626g0010 (PRP39)


Aliases : PRP39

Description : pre-mRNA-processing protein (PRP39)


Gene families : OG0002297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6626g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00179p00033790 AT PRP39-2,... No description available 0.03 OrthoFinder output from all 47 species
Adi_g019406 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114841 AT PRP39-2, PRP39-2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12647 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31680.t2 PRP39, Aspi01Gene31680 pre-mRNA-processing protein *(PRP39) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G096600.1 PRP39, Ceric.04G096600 pre-mRNA-processing protein *(PRP39) & original... 0.03 OrthoFinder output from all 47 species
Cre16.g670300 PRP39 No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g11200.1 PRP39, LOC_Os03g11200 pre-mRNA-processing protein (PRP39) 0.03 OrthoFinder output from all 47 species
LOC_Os08g29124.1 AT PRP39-2,... pre-mRNA-processing protein (PRP39) 0.02 OrthoFinder output from all 47 species
Lfl_g19659 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60863 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g21848 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29159 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19871 PRP39 pre-mRNA-processing protein *(PRP39) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000702_P004 PRP39, Zm00001e000702 pre-mRNA-processing protein (PRP39) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!