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  5. LOC_Os01g42990.1

LOC_Os01g42990.1


Description : Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana (sp|q9m065|pp352_arath : 108.0)


Gene families : OG_01_0021473 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0021287 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0020534 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42990.1
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
Zm00001e020707_P001 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.05 Archaeplastida
Zm00001e020707_P001 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.05 LandPlants
Zm00001e020707_P001 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 546 643
IPR002885 Pentatricopeptide_repeat 272 299
IPR002885 Pentatricopeptide_repeat 228 255
IPR002885 Pentatricopeptide_repeat 158 184
No external refs found!