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  5. MA_651220g0010

MA_651220g0010


Description : Elongation factor 1-alpha OS=Oryza sativa subsp. japonica (sp|o64937|ef1a_orysj : 317.0)


Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_651220g0010
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.04 OrthoFinder output from all 47 species
Adi_g109079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09508 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Aop_g20702 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0291.g063341 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Cba_g27290 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G004900.1 Ceric.31G004900 aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04717 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08010.1 LOC_Os03g08010 aminoacyl-tRNA binding factor (eEF1A) 0.08 OrthoFinder output from all 47 species
LOC_Os03g08020.1 LOC_Os03g08020 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08050.1 LOC_Os03g08050 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Len_g51156 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g17369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 OrthoFinder output from all 47 species
Ore_g12703 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Ore_g45064 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12882 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16999 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.02 OrthoFinder output from all 47 species
Sam_g28089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39768 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species
Smo171512 No alias Protein biosynthesis.translation elongation.eEF1A... 0.05 OrthoFinder output from all 47 species
Smo270693 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 OrthoFinder output from all 47 species
Solyc06g005060.3.1 Solyc06g005060 aminoacyl-tRNA binding factor (eEF1A) 0.04 OrthoFinder output from all 47 species
Spa_g24426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46937 No alias aminoacyl-tRNA binding factor *(eEF1A)) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 5 172
No external refs found!