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  5. MA_634003g0010

MA_634003g0010


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 185.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_634003g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00123610 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50120 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g00763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05743.t1 Aspi01Gene05743 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23387.t1 Aspi01Gene23387 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23389.t2 Aspi01Gene23389 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene44877.t1 Aspi01Gene44877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45294.t1 Aspi01Gene45294 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68894.t1 Aspi01Gene68894 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68895.t1 Aspi01Gene68895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72933.t1 Aspi01Gene72933 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G075900.1 Ceric.12G075900 not classified & original description: pacid=50601390... 0.05 OrthoFinder output from all 47 species
Ceric.13G024800.1 Ceric.13G024800 not classified & original description: pacid=50636465... 0.03 OrthoFinder output from all 47 species
Ceric.13G024900.1 Ceric.13G024900 not classified & original description: pacid=50636356... 0.05 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.02 OrthoFinder output from all 47 species
Dac_g07418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g36861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005956 No alias not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026269 No alias not classified & original description: CDS=1-1944 0.04 OrthoFinder output from all 47 species
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g35902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018669_P001 Zm00001e018669 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 31 59
IPR001680 WD40_repeat 168 200
IPR001680 WD40_repeat 66 101
No external refs found!