LOC_Os01g41880.1


Description : RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum (sp|q9sq56|rgga_tobac : 98.6)


Gene families : OG_01_0002128 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002128_tree ,
OG_02_0001404 (LandPlants) Phylogenetic Tree(s): OG_02_0001404_tree ,
OG_03_0002073 (SeedPlants) Phylogenetic Tree(s): OG_03_0002073_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g41880.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G17520 No alias Hyaluronan / mRNA binding family 0.07 Archaeplastida
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_141447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c7_26560V3.1 No alias Hyaluronan / mRNA binding family 0.03 Archaeplastida
Solyc01g090190.3.1 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 Archaeplastida
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 Archaeplastida
Zm00001e026661_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 Archaeplastida
AT4G17520 No alias Hyaluronan / mRNA binding family 0.07 LandPlants
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 LandPlants
MA_141447g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp4g04410.1 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c7_26560V3.1 No alias Hyaluronan / mRNA binding family 0.03 LandPlants
Solyc01g090190.3.1 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.07 LandPlants
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 LandPlants
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 LandPlants
Zm00001e026661_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 LandPlants
AT4G17520 No alias Hyaluronan / mRNA binding family 0.07 SeedPlants
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 SeedPlants
MA_141447g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g090190.3.1 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.07 SeedPlants
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 SeedPlants
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 SeedPlants
Zm00001e026661_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006861 HABP4_PAIRBP1-bd 156 268
IPR019084 Stm1-like_N 1 68
No external refs found!