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  5. LOC_Os01g41880.1

LOC_Os01g41880.1


Description : RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum (sp|q9sq56|rgga_tobac : 98.6)


Gene families : OG_01_0002128 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002128_tree ,
OG_02_0001404 (LandPlants) Phylogenetic Tree(s): OG_02_0001404_tree ,
OG_03_0002073 (SeedPlants) Phylogenetic Tree(s): OG_03_0002073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g41880.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G17520 No alias Hyaluronan / mRNA binding family 0.07 Archaeplastida
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 Archaeplastida
MA_141447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c7_26560V3.1 No alias Hyaluronan / mRNA binding family 0.03 Archaeplastida
Solyc01g090190.3.1 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 Archaeplastida
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 Archaeplastida
Zm00001e026661_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 Archaeplastida
AT4G17520 No alias Hyaluronan / mRNA binding family 0.07 LandPlants
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 LandPlants
MA_141447g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp4g04410.1 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c7_26560V3.1 No alias Hyaluronan / mRNA binding family 0.03 LandPlants
Solyc01g090190.3.1 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.07 LandPlants
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 LandPlants
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 LandPlants
Zm00001e026661_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 LandPlants
AT4G17520 No alias Hyaluronan / mRNA binding family 0.07 SeedPlants
GSVIVT01018290001 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana 0.03 SeedPlants
MA_141447g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g090190.3.1 No alias RGG repeats nuclear RNA binding protein A OS=Arabidopsis... 0.07 SeedPlants
Zm00001e019955_P001 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 SeedPlants
Zm00001e019958_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 SeedPlants
Zm00001e026661_P002 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006861 HABP4_PAIRBP1-bd 156 268
IPR019084 Stm1-like_N 1 68
No external refs found!