LOC_Os01g41190.2


Description : component CASC3 of RNA quality control Exon Junction complex


Gene families : OG_01_0004329 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004329_tree ,
OG_02_0003530 (LandPlants) Phylogenetic Tree(s): OG_02_0003530_tree ,
OG_03_0006568 (SeedPlants) Phylogenetic Tree(s): OG_03_0006568_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g41190.2
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AT1G15280 No alias CASC3/Barentsz eIF4AIII binding 0.04 Archaeplastida
MA_10431738g0010 No alias component CASC3 of RNA quality control Exon Junction complex 0.03 Archaeplastida
Mp8g03760.1 No alias component CASC3 of RNA quality control Exon Junction complex 0.02 Archaeplastida
Solyc12g042990.3.1 No alias component CASC3 of RNA quality control Exon Junction complex 0.03 Archaeplastida
AT1G15280 No alias CASC3/Barentsz eIF4AIII binding 0.03 LandPlants
MA_10431738g0010 No alias component CASC3 of RNA quality control Exon Junction complex 0.02 LandPlants
Solyc12g042990.3.1 No alias component CASC3 of RNA quality control Exon Junction complex 0.02 LandPlants
Zm00001e027475_P001 No alias component CASC3 of RNA quality control Exon Junction complex 0.02 LandPlants
Zm00001e032233_P001 No alias component CASC3 of RNA quality control Exon Junction complex 0.01 LandPlants
AT1G15280 No alias CASC3/Barentsz eIF4AIII binding 0.03 SeedPlants
AT1G80000 No alias CASC3/Barentsz eIF4AIII binding 0.02 SeedPlants
GSVIVT01017130001 No alias RNA processing.RNA quality control Exon Junction complex... 0.01 SeedPlants
MA_10431738g0010 No alias component CASC3 of RNA quality control Exon Junction complex 0.02 SeedPlants
Solyc12g042990.3.1 No alias component CASC3 of RNA quality control Exon Junction complex 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018545 Btz_dom 136 237
No external refs found!