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  5. LOC_Os01g40410.1

LOC_Os01g40410.1


Description : solute transporter (AAAP)


Gene families : OG_01_0000208 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000208_tree ,
OG_02_0000265 (LandPlants) Phylogenetic Tree(s): OG_02_0000265_tree ,
OG_03_0013110 (SeedPlants) Phylogenetic Tree(s): OG_03_0013110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g40410.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00251810 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AMTR_s00010p00252100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AMTR_s00066p00056580 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.02 Archaeplastida
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01033627001 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
LOC_Os01g41420.1 No alias solute transporter (AAAP) 0.03 Archaeplastida
MA_10426730g0010 No alias solute transporter (AAAP) 0.03 Archaeplastida
MA_10430942g0010 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_17204g0020 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c10_6930V3.1 No alias Transmembrane amino acid transporter family protein 0.02 Archaeplastida
Pp3c3_22670V3.1 No alias Transmembrane amino acid transporter family protein 0.02 Archaeplastida
Pp3c9_20170V3.1 No alias Transmembrane amino acid transporter family protein 0.02 Archaeplastida
Solyc03g063040.4.1 No alias Amino acid transporter AVT1B OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc06g061260.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g061270.2.1 No alias solute transporter (AAAP) 0.04 Archaeplastida
Zm00001e039154_P004 No alias solute transporter (AAAP) 0.03 Archaeplastida
AMTR_s00010p00252100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 LandPlants
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.02 LandPlants
MA_10430942g0010 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.01 LandPlants
MA_17204g0020 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.01 LandPlants
Solyc03g063040.4.1 No alias Amino acid transporter AVT1B OS=Arabidopsis thaliana... 0.01 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 68 452
No external refs found!