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  5. MA_59732g0010

MA_59732g0010


Description : Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana (sp|q9ldd1|brg3_arath : 90.9)


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_59732g0010
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
Adi_g040999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03728 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12707 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020407001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.06 OrthoFinder output from all 47 species
Lfl_g08821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g27230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023588 SBP1 not classified & original description: CDS=3746-4861 0.01 OrthoFinder output from all 47 species
Zm00001e033278_P001 Zm00001e033278 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!