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  5. MA_5779g0010

MA_5779g0010 (FCA)


Aliases : FCA

Description : Flowering time control protein FCA OS=Arabidopsis thaliana (sp|o04425|fca_arath : 248.0)


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_5779g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00168380 FCA,... Flowering time control protein FCA OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g021978 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G023200.1 FCA, Ceric.04G023200 transcription factor *(FCA/SSF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G016000.1 Ceric.06G016000 not classified & original description: pacid=50619514... 0.02 OrthoFinder output from all 47 species
Ceric.14G007400.1 FCA, Ceric.14G007400 transcription factor *(FCA/SSF) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g43236 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19292 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00863 FCA no description available(sp|b8bcz8|fca_orysi : 290.0) 0.03 OrthoFinder output from all 47 species
Gb_05124 FCA no description available(sp|b8bcz8|fca_orysi : 224.0) 0.05 OrthoFinder output from all 47 species
LOC_Os09g03610.1 FCA, LOC_Os09g03610 no description available(sp|q6k271|fca_orysj : 775.0) 0.03 OrthoFinder output from all 47 species
Len_g09308 RBP-DR1, AtRBP-DR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22611 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06188 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g15600.1 FCA Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g19709 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13897 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26456 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g058450.3.1 FCA, Solyc01g058450 Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g26694 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009433_P002 FCA, Zm00001e009433 no description available(sp|b8bcz8|fca_orysi : 625.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 102 140
IPR000504 RRM_dom 240 305
IPR001202 WW_dom 739 765
No external refs found!