1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_57429g0010

MA_57429g0010 (AtRH36, SWA3, RH36)


Aliases : AtRH36, SWA3, RH36

Description : DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana (sp|q9sa27|rh36_arath : 165.0)


Gene families : OG0001703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001703_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_57429g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g103437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00934 AtRH36, SWA3, RH36 SSU processome assembly factor *(SWA3) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.20 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_36370 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g19410.1 AtRH36, SWA3, RH36 SSU processome assembly factor (SWA3) 0.03 OrthoFinder output from all 47 species
Mp4g20180.1 No alias DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 82 166
No external refs found!