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  5. MA_57417g0010

MA_57417g0010


Description : scaffolding component Sec31 of coat protein complex


Gene families : OG0003227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_57417g0010
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT3G63460 No alias transducin family protein / WD-40 repeat family protein 0.04 OrthoFinder output from all 47 species
Adi_g011557 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Aev_g07314 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Ala_g22457 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Aob_g15456 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Aop_g12879 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0231.g059267 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Cba_g13907 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Ceric.02G027200.1 Ceric.02G027200 scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.4 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Cre12.g522450 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder output from all 47 species
Dcu_g03156 No alias scaffold component *(Sec31) of coat protein complex &... 0.07 OrthoFinder output from all 47 species
Dde_g05955 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g21292 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01001441001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.08 OrthoFinder output from all 47 species
Gb_38895 No alias scaffolding component Sec31 of coat protein complex 0.08 OrthoFinder output from all 47 species
Len_g13782 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g04962 No alias scaffold component *(Sec31) of coat protein complex &... 0.05 OrthoFinder output from all 47 species
MA_10435529g0010 No alias scaffolding component Sec31 of coat protein complex 0.07 OrthoFinder output from all 47 species
Mp7g09730.1 No alias scaffolding component Sec31 of coat protein complex 0.06 OrthoFinder output from all 47 species
Msp_g15835 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g04454 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Ore_g03111 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Ore_g26748 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Ore_g34792 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Pir_g13045 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g32771 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Smo230767 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc01g088020.3.1 Solyc01g088020 scaffolding component Sec31 of coat protein complex 0.04 OrthoFinder output from all 47 species
Spa_g11489 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Tin_g14980 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e010894_P003 Zm00001e010894 scaffolding component Sec31 of coat protein complex 0.06 OrthoFinder output from all 47 species
Zm00001e035747_P003 Zm00001e035747 scaffolding component Sec31 of coat protein complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 113 146
No external refs found!