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  5. MA_565182g0010

MA_565182g0010


Description : 40S ribosomal protein S2-2 OS=Arabidopsis thaliana (sp|q93vb8|rs22_arath : 86.7)


Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_565182g0010
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AT1G58684 No alias Ribosomal protein S5 family protein 0.03 OrthoFinder output from all 47 species
AT1G58983 No alias Ribosomal protein S5 family protein 0.03 OrthoFinder output from all 47 species
AT2G41840 No alias Ribosomal protein S5 family protein 0.03 OrthoFinder output from all 47 species
Aop_g09364 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre01.g039250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g05423 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Mp5g15970.1 No alias component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Ore_g03081 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ore_g17004 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc04g063290.3.1 Solyc04g063290 component RPS2 of SSU proteome 0.03 OrthoFinder output from all 47 species
Tin_g01630 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e006090_P001 Zm00001e006090 component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e011816_P001 Zm00001e011816 component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 1 45
No external refs found!