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  5. MA_55648g0010

MA_55648g0010 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 617.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_55648g0010

Target Alias Description ECC score Gene Family Method Actions
MA_106123g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_110266g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_117676g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_183278g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_86894g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Pir_g04191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08380 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13229 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 211 237
IPR002885 Pentatricopeptide_repeat 239 263
IPR002885 Pentatricopeptide_repeat 301 328
IPR002885 Pentatricopeptide_repeat 271 299
IPR032867 DYW_dom 604 728
IPR002885 Pentatricopeptide_repeat 431 479
IPR002885 Pentatricopeptide_repeat 329 377
IPR002885 Pentatricopeptide_repeat 134 183
No external refs found!