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  5. MA_555156g0010

MA_555156g0010 (LRS1)


Aliases : LRS1

Description : no hits & (original description: none)


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_555156g0010

Target Alias Description ECC score Gene Family Method Actions
AT3G05090 LRS1 Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g098959 LRS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117310 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ala_g02471 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19503.t1 LRS1, Aspi01Gene19503 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53261.t2 LRS1, Aspi01Gene53261 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58195.t1 LRS1, Aspi01Gene58195 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58196.t1 LRS1, Aspi01Gene58196 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0272.g061280 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g23051 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.06G068400.1 LRS1, Ceric.06G068400 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
LOC_Os12g06810.1 LRS1, LOC_Os12g06810 Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species
MA_118879g0010 LRS1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18695g0010 LRS1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ore_g09811 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g09739 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Smo139346 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Solyc01g098090.3.1 LRS1, Solyc01g098090 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Zm00001e018453_P003 LRS1, Zm00001e018453 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 215 246
IPR001680 WD40_repeat 34 67
IPR001680 WD40_repeat 115 154
No external refs found!